Return to main results Retrieve Phyre Job Id

Job DescriptionP77541
Confidence92.22%DateThu Jan 5 12:30:23 GMT 2012
Rank293Aligned Residues95
% Identity19%Templated1o4ua1
SCOP infoTIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190.........200.... .....210
Predicted Secondary structure 





















..

Query SS confidence 







































































. .





Query Sequence  SKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ. . VPILAN
Query Conservation    
    

 

  
    
  
 




    





 

 

 




 


      
        
 .. 

   
Alig confidence 









....













.....




....
















.











..





Template Conservation      

   
....        
 


 .....
 


....  
   


 
 

   .                 
 
Template Sequence  SAERAVQEVR. . . . KIIPFTTKIEVEVE. . . . . NLEDA. . . . LRAVEAGADIVMLDNLS. PEEVKDISRRIKDINPNVIV
Template Known Secondary structure  S....TTS
TTS
S.....S....TT
SS

.
TTS
Template Predicted Secondary structure  ....





.....
....






.




Template SS confidence 















































































   166...170..... ....180......... 190.... .....200.........210. ........220.........230.
 
   211........220.........230.........240..
Predicted Secondary structure 














Query SS confidence 































Query Sequence  ITEFGATPLFTTDELRSAHVAMALYPLSAFRA
Query Conservation      
 

     

  

   
        
Alig confidence 







.






















Template Conservation   
 


  . 

      


 
 


    
Template Sequence  EVSGGITE. ENVSLYDFETVDVISSSRLTLQE
Template Known Secondary structure 


T.TTGGGG

TT

GGGTSS
Template Predicted Secondary structure 



.






Template SS confidence 































   232....... 240.........250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions