Job Description P77541 Confidence 96.00% Date Thu Jan 5 12:30:23 GMT 2012 Rank 168 Aligned Residues 173 % Identity 13% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G
Query Conservation
Alig confidence														.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	R	L	N	A	G	E	I	V	I	.	.	.	.	G	D	G	G	F	V	F	A	L	E	K	R	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T					.	.	.	.			T	T									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	.	.	.	.	A	V	E
Query Conservation																																																																											.	.	.	.
Alig confidence		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	F	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	A	A	A	D	I	A	R	Q	V	A	D	E	G	D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	L	S	A	K
Template Known Secondary structure		.	.	.																T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T															T	T
Template Predicted Secondary structure		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure									.	.	.	.																																.	.	.											.	.	.	.	.	.
Query SS confidence									.	.	.	.																																.	.	.											.	.	.	.	.	.
Query Sequence		G	L	D	A	A	I	E	.	.	.	.	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	Q	V	P	I	L	A	N	I	T	E	.	.	.	.	.	.	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M
Query Conservation									.	.	.	.																																.	.	.											.	.	.	.	.	.
Alig confidence									.	.	.	.																																.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	T	E	V	K	K	V	F	L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I
Template Known Secondary structure																				T	T		S								S													G	G	G	S	S									B	T	T	B	S	T	T	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		233	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	L	Y	P	L	S	A	.	F	R	A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q	E	G
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		I	G	V	N	C	H	F	D	P	T	I	S	L	K	T	V	K	L	M	K	E	G	L	E	A	A	Q
Template Known Secondary structure						S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions