Job Description P77541 Confidence 97.06% Date Thu Jan 5 12:30:23 GMT 2012 Rank 112 Aligned Residues 202 % Identity 22% Template d1jvna1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes Resolution 2.10

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	.	.	.	.	.	.	.	A	R	T	V	K	S
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.																				.	.						.						.	.	.	.	.	.	.
Template Conservation																.	.												.	.	.	.	.	.	.	.																				.	.						.
Template Sequence		A	Q	K	Y	Y	Q	Q	G	A	D	E	V	T	F	.	.	L	N	I	T	D	C	P	L	K	D	T	.	.	.	.	.	.	.	.	P	M	L	E	V	L	K	Q	A	A	K	T	V	F	V	P	L	T	V	.	.	G	G	G	I	K	.	D	I	V	D	V	D	G	T	K	I	P	A	L	E	V	A	S	L
Template Known Secondary structure								T	T		S					.	.								G	G	G		.	.	.	.	.	.	.	.										T	T	T			S					.	.		S	S		S	.					T	T
Template Predicted Secondary structure																.	.												.	.	.	.	.	.	.	.																				.	.						.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	.	.	.	.	.	.	.	.	.	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																	.	.								.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Sequence		Y	F	R	S	G	A	D	K	V	S	I	.	.	.	.	.	.	.	.	.	.	.	.	G	T	D	A	V	Y	A	A	E	K	Y	Y	E	L	G	N	R	G	D	G	T	S	P	I	E	T	I	S	K	A	Y	G	A	Q	A	V	V	I	S	.	.	V	D	P	K	R	V	Y	V	N	S	Q	A	D	T	K	N
Template Known Secondary structure						T		S					.	.	.	.	.	.	.	.	.	.	.	.														T	T	S				S		S											G	G	G					.	.									S	S	G	G	G		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.													.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
																																	166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	.	.	.	.	.	.	.	.	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		K	V	F	E	T	E	Y	P	G	P	N	G	E	K	Y	C	W	Y	Q	C	T	I	K	G	G	R	E	S	R	D	L	G	V	W	E	L	T	.	.	.	R	A	C	E	A	L	G	A	G	E	I	L	L	N	C	I	D	K	D	G	S	N	S	G	Y	D	L	E	L	I	E	H	V	K	D	A	V	K	I	P
Template Known Secondary structure							S	S			T	T												T	T	T	T												.	.	.						T	T									G	G	G	T	T	T		S															S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	.	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I	D	T
Query Conservation																				.
Alig confidence						.	.	.												.															.
Template Conservation						.	.	.																											.
Template Sequence		V	I	A	S	.	.	.	S	G	A	G	V	P	E	H	F	E	E	A	F	L	K	T	R	A	D	A	C	L	G	A	G	M	.	F	H	R	G	E	F	T	V	N	D	V	K	E	Y	L	L	E	H	G	L	K	V	R	M	D	E	E
Template Known Secondary structure						.	.	.	S				S											S			S					S			.			T	T	S													T	T
Template Predicted Secondary structure						.	.	.																											.
Template SS confidence
		496	.	.	.				500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions