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Job DescriptionP77541
Confidence70.30%DateThu Jan 5 12:30:23 GMT 2012
Rank425Aligned Residues170
% Identity13%Templated1dbta_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  LTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDA
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Template Sequence  PSIVKQLKER. NCELFLDLKLH. . DIPTTVNKAMKRLASLGVDLVNVHAAGGK. . . . . . . . . . . . KMMQAALEGLEEGTP
Template Known Secondary structure  T.T

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TTT
SGGG
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   44.....50... ......60.... .....70.........80.........90... ......100........
 
   148.150.........160...... ...170.........180.........190.........200.........210
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Query Sequence  KTDPDFVIMARTDALAVEG. . . . . . . . . . . . . LDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILAN. . . .
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Template Sequence  AGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGV. . . . VCSVHEAKAIYQAVSPSFLTVTPGI
Template Known Secondary structure  TTS



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TT
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GGGTTTS
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   109110.........120.........130.........140.........150......... 160.........170.........180....
 
   211........220.........230.........240... ......250......
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Query Sequence  . . . . ITEFGATPLFTTDELRSAHVAMALYPLSAFRAM. . NRAAEHVYNVLRQ
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Template Sequence  RMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEG
Template Known Secondary structure 

TTS

TT
SS
B
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   185....190.........200.........210.........220.........230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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