Job Description P77541 Confidence 95.88% Date Thu Jan 5 12:30:23 GMT 2012 Rank 173 Aligned Residues 156 % Identity 17% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	.	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D
Query Conservation																								.
Alig confidence																								.																								.	.			.	.	.	.	.	.	.
Template Conservation																																																.	.			.	.	.	.	.	.	.
Template Sequence		V	I	L	E	R	E	R	L	D	K	F	G	R	P	L	L	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	.	.	D	D	.	.	.	.	.	.	.	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N
Template Known Secondary structure										T			S	S								S	S	S	S																		T		S	B		.	.			.	.	.	.	.	.	.	T	T		S	S	B	T	T	B
Template Predicted Secondary structure																																																.	.			.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		147	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure					.	.	.	.	.																																																					.	.	.													.	.	.	.	.
Query SS confidence					.	.	.	.	.																																																					.	.	.													.	.	.	.	.
Query Sequence		A	K	T	.	.	.	.	.	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	.	.	.	A	V	Q	V	P	I	L	A	N	I	T	E	.	.	.	.	.
Query Conservation					.	.	.	.	.																																																					.	.	.													.	.	.	.	.
Alig confidence					.	.	.	.	.												.	.	.	.	.																																					.	.	.													.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		K	A	S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	.	.	.	.	.	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S
Template Known Secondary structure								T	S			B								S	.	.	.	.	.	S														T	T		S						G	G	G															T	T								T	T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	.	.	.	.	H	V	A	M	A	L	Y	P	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		R	Q	K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T
Template Known Secondary structure		S		T	T	S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions