Job Description P77541 Confidence 96.71% Date Thu Jan 5 12:30:23 GMT 2012 Rank 127 Aligned Residues 211 % Identity 17% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	.	.	.	.	.	.	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	.	.	.	.	.	.	.	.	.	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I
Query Conservation																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																					.
Template Sequence		F	R	K	F	Y	K	E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	.	D	I	H	S	V	F	E	L	L	A	R	I
Template Known Secondary structure		G	G	G	S		S	S	S								T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T		.											T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	.	.	.	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P
Query Conservation																							.	.	.
Alig confidence				.	.							.	.	.					.				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.							.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	.	.	K	K	A	L	V	F	.	.	.	X	V	Y	Y	.	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L
Template Known Secondary structure				.	.	S	S					.	.	.					.																		T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G												T
Template Predicted Secondary structure				.	.							.	.	.					.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.			.	.	.	.	.	90				.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.													.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template Sequence		I	T	L	V	S	V	T	T	P	.	.	.	.	.	.	.	.	.	.	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	.	.	.	F	G	I	Q	N	N
Template Known Secondary structure							T	T	S		.	.	.	.	.	.	.	.	.	.									T	T			S								S		S	S																			T	T			S						.	.	.	S	S			S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	.	.	.	.	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation																									.	.	.	.
Alig confidence										.															.	.	.	.
Template Conservation										.
Template Sequence		Q	D	V	K	R	X	R	K	.	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E	E	I	F	K
Template Known Secondary structure								T	T	.	T	S	S												T	T	S	S												T	T
Template Predicted Secondary structure										.
Template SS confidence
		209	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions