Return to main results Retrieve Phyre Job Id

Job DescriptionP77541
Confidence91.15%DateThu Jan 5 12:30:23 GMT 2012
Rank316Aligned Residues168
% Identity9%Templatec3t9pB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme family protein from roseovarius
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMAR
Query Conservation    




 
 


     
  

     


 

 



   
 

      

  
    

 

  
    
  
 

Alig confidence 



































......






























...



Template Conservation      
                        

   

......


             
   
  

   
  ...  
 
Template Sequence  PVRAYASSMRRDITPEDEAERFCRLRDDKGFTAFKW. . . . . . RVGAEAGRDHDEWPGRTEAVVPTVSRALGDG. . . IEKL
Template Known Secondary structure 


SSS



......
S
TT
TT

SSTT
TT...
Template Predicted Secondary structure 













......
















...
Template SS confidence 















































































   133......140.........150.........160........ .170.........180.........190......... 200...
 
   159160.........170.........180.........190. ........200.........210.........220.........230.......
Predicted Secondary structure 












.



















Query SS confidence 
































.













































Query Sequence  TDALAVEGLDAAIERAQAYVEAGAEMLFPEAIT. ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPL
Query Conservation 


    





 

 

 




 


    .  
        
  

       
 

     

  

   
    
Alig confidence 
































.
























...

















Template Conservation 



       
      
    
  



    
      
      


 


    ...     

     
 
  
Template Sequence  VDGNSCYSPARAIEVGKLLQDNGIGHFEEPCPYWEYDQTAAVRAALLLDVAGGEQDCEY. . . SSWQLMLDRGAVDIVQPD
Template Known Secondary structure 
TT


TT



S
TT

SS
TT

S...TT

S


Template Predicted Secondary structure 

























...





Template SS confidence 















































































   204.....210.........220.........230.........240.........250.........260.. .......270.........280
 
   238.240.........250........
Predicted Secondary structure 

Query SS confidence 




















Query Sequence  SAFRAMNRAAEHVYNVLRQEG
Query Conservation      

  
       
   
Alig confidence 




















Template Conservation      



    
   
   
Template Sequence  VMYMGGMHRTLQVCQMAARAG
Template Known Secondary structure  TSTT
Template Predicted Secondary structure 







Template SS confidence 




















   281........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions