Job Description P77541 Confidence 97.22% Date Thu Jan 5 12:30:23 GMT 2012 Rank 104 Aligned Residues 205 % Identity 14% Template c3qz6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:hpch/hpai aldolase; PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		G	K	A	F	R	A	A	L	T	K	E	N	P	L	Q	I	V	.	.	.	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L
Query Conservation																			.	.	.
Alig confidence																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		A	X	F	L	K	K	K	L	S	A	G	K	S	V	V	G	T	X	L	N	L	V	Y	N	P	D	I	V	R	I	Y	A	E	A	G	L	D	Y	F	I	V	D	C	.	.	.	.	.	.	.	.	.	.	.	E	H	A	A	Y	T	F	R	E	I	N	H	L	V	S	V	.	A	K	N	A	G	V	S	V	L
Template Known Secondary structure											T	T									S	S				T	T								T	T		S						S	.	.	.	.	.	.	.	.	.	.	.	S	S	S														.					T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	I	P	Q	V	.	.	D	.	.	.	.	.	R	A	H	V	Q	R	L	L	D	I	G	A	E	G	F	X	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	Q	S	A	E	T	X	R	E	T	V	R	L	A	K	Y	P	P	L	G	E	R	G	V	G	G	S	I	V	T	D	F
Template Known Secondary structure					S	S		.	.		.	.	.	.	.											T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S												S		T	T	T								G	G	G	G	T	T
Template Predicted Secondary structure								.	.		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.			.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
											147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.												.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	.	G	A	E	M	L	F	P	.	.	.	.	.	.	.	.	.	.	.	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		K	P	V	N	W	A	E	W	V	Q	E	R	N	D	E	I	F	I	X	A	Q	I	E	H	.	.	.	.	.	.	V	K	A	V	E	D	I	D	S	I	L	A	V	Q	G	V	D	A	V	I	F	G	P	R	D	L	S	N	D	L	G	I	I	G	Q	T	E	H	P	K	V	Y	E	C	Y	E	K	V	Y	R
Template Known Secondary structure															T	T										.	.	.	.	.	.						T						T	S	T	T															T	T		T	T		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
							204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.																			.
Template Conservation																				.	.	.	.																			.
Template Sequence		A	A	D	R	Q	G	V	V	K	G	F	F	T	A	A	D	A	A	.	.	.	.	K	X	G	W	A	V	E	R	G	A	Q	X	L	L	W	S	G	D	.	V	A	A	L	Q	T	Y	T	A	K	G	V	K	T	I	K	E
Template Known Secondary structure							T								S	S		G	G	.	.	.	.	G	G						T	T										.																	T
Template Predicted Secondary structure																				.	.	.	.																			.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions