Job Description P77541 Confidence 97.58% Date Thu Jan 5 12:30:23 GMT 2012 Rank 86 Aligned Residues 206 % Identity 16% Template c3qjaA_ PDB info PDB header:lyase Chain: A: PDB Molecule:indole-3-glycerol phosphate synthase; PDBTitle: crystal structure of the mycobacterium tuberculosis indole-3-glycerol2 phosphate synthase (trpc) in apo form Resolution 1.29 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	.	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I
Query Conservation																						.
Alig confidence																						.																	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Sequence		V	M	A	A	L	R	E	P	G	I	G	V	I	A	E	V	K	D	P	A	K	L	A	Q	A	Y	Q	D	G	G	A	R	I	V	S	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	Q	R	R	F	Q	G	S	L	D	D	L	D	A	V	R	A	S	V	S	I	P	V	L	R	K	.	.	.
Template Known Secondary structure							T	S	S	S																				T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G																S	S						.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.														80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D
Query Conservation
Alig confidence								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.													.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.													.	.	.	.	.	.	.	.	.
Template Sequence		D	F	V	V	Q	P	.	.	.	.	Y	Q	I	H	E	A	R	A	H	G	A	D	M	L	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	A	L	E	Q	S	V	L	V	S	M	L	D	R	T	E	.	.	S	L	G	M	T	A	L	V	E	V	H	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S				S		.	.	.	.									T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S														.	.		T	T								S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.														.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	.	.	.	.	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A
Query Conservation																							.	.	.	.	.	.
Alig confidence		.	.																				.	.	.	.	.	.																														.
Template Conservation		.	.																																																							.
Template Sequence		.	.	E	Q	E	A	D	R	A	L	K	A	G	A	K	V	I	G	V	N	A	R	D	L	M	T	L	D	V	D	R	D	C	F	A	R	I	A	P	G	L	P	S	S	V	I	R	I	A	E	S	G	V	R	G	T	.	A	D	L	L	A	Y	A	G	A	G	A	D	A	V	L	V	G	E	G	L	V	T	S
Template Known Secondary structure		.	.											T		S						S	B		T	T	T			B		T	T						G	G	G	S		T	T	S						S				S		.									T	T		S										T
Template Predicted Secondary structure		.	.																																																							.
Template SS confidence
				172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	R	A	A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		G	.	.	D	P	R	A	A	V	A	D	L	V	T	A	G	T	H	P	S	C	P
Template Known Secondary structure		S	.	.											T	T	T	T		S
Template Predicted Secondary structure			.	.
Template SS confidence
		249			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions