Job Description P77541 Confidence 96.17% Date Thu Jan 5 12:30:23 GMT 2012 Rank 153 Aligned Residues 135 % Identity 21% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.				.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.							.	.	.					.
Query SS confidence																																												.	.	.	.	.	.	.							.	.	.					.
Query Sequence		F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	.	.	.	.	.	.	.	G	S	L	G	L	P	.	.	.	D	L	G	I	.	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C
Query Conservation																																												.	.	.	.	.	.	.							.	.	.					.
Alig confidence																														.														.	.	.	.	.	.	.							.	.	.					.
Template Conservation																														.
Template Sequence		L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	A	L	G	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G
Template Known Secondary structure									T	T									S	G	G	G								.		S						G	G	G	T	T									G	G	G		S								T	T																T	T
Template Predicted Secondary structure																														.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		79	80																																			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																	.
Template Sequence		N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	G	.	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H	P	E	P	E	K	A	L
Template Known Secondary structure												B			S		S	S	S	S	S	B			T	T									B	S	S						T	T	T	T	T		.		G	G	G												T		S						B		S		T	T	T		S
Template Predicted Secondary structure																																																	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	S	D	G	K	Q	S	L	D	F	E	L	F	K	E	L	V	Q	E	M	K	K	L
Template Known Secondary structure		.	S	S	G	G	G		B
Template Predicted Secondary structure		.
Template SS confidence
			308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions