Job Description P77541 Confidence 46.71% Date Thu Jan 5 12:30:23 GMT 2012 Rank 476 Aligned Residues 142 % Identity 17% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	.	.	.	.	.	.	.	.	.	.	.	V	G	A	K	R	C	G	H	R	P	N	K	.	.	.	.	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		I	Q	Q	Y	R	D	A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R
Template Known Secondary structure															T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		159	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.																			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	A	L	A	.	.	.	.	.	.	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	.	A	G	A	E	M	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E
Query Conservation							.	.	.	.	.	.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																.	.
Template Conservation																																																												.																.	.
Template Sequence		A	T	P	E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	.	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	.	.	I	A	S	G
Template Known Secondary structure				S					T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B	.										T	T	S	S			.	.				S
Template Predicted Secondary structure																																																												.																.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F
Query Conservation
Alig confidence																.		.
Template Conservation																.		.
Template Sequence		G	I	N	S	P	E	S	A	L	D	A	L	Q	H	.	A	.	D	X	V	G	X	S	S	P	F	V
Template Known Secondary structure		S			S								G	G	G	.		.	S					S	T
Template Predicted Secondary structure																.		.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.		320		.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions