Job Description P77541 Confidence 59.13% Date Thu Jan 5 12:30:23 GMT 2012 Rank 454 Aligned Residues 152 % Identity 20% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.					.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																			.											.	.	.	.				.																				.
Query SS confidence																			.											.	.	.	.				.																				.
Query Sequence		G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	.	V	C	S	L	P	L	L	V	D	A	.	.	.	.	D	I	G	.	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	.	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V
Query Conservation																			.											.	.	.	.				.																				.
Alig confidence																			.											.	.	.	.				.																				.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F
Template Known Secondary structure		T	T	T																		S	S									G	G	G	T		S	S																		S			S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																											.															.	.	.	.	.	.	.	.
Query SS confidence																																																											.															.	.	.	.	.	.	.	.
Query Sequence		S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	.	.	.	.
Query Conservation																																																											.															.	.	.	.	.	.	.	.
Alig confidence																				.	.																																						.															.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	.	.	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A
Template Known Secondary structure		G															T	T		.	.									S	S																		T	T		S									S	S																		T
Template Predicted Secondary structure																				.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.																			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	P	I	L	A	N	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	P	I	I	T	M	S	M	S	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	G	Q	I	S	V	A	D	L	R	T	V
Template Known Secondary structure		S	S								T	G	G	G	T																	B					B
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions