Job Description P77541 Confidence 95.17% Date Thu Jan 5 12:30:23 GMT 2012 Rank 207 Aligned Residues 138 % Identity 7% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	.	.	.	.	.	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C
Template Known Secondary structure																T		S						.	.	.	.	.			T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		158	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	D	A	L	.	.	.	.	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T
Query Conservation							.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																.	.
Template Conservation																										.																														.																.	.
Template Sequence		R	I	T	V	E	E	E	I	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	.	G	E	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	.	E	E	F	V	A	G	L	K	K	L	T	T	K	P	V	.	.	V	G	V	G	R	F	T	S
Template Known Secondary structure					S				S	T	T	S														.	T	T	S	S	S							S	S					S			T	T	T			T	T	T	T	.					T	T	T	G	G	G		S	S			.	.				S
Template Predicted Secondary structure																										.																														.																.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I
Template Known Secondary structure											T	T	S		S					S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions