Job Description P77541 Confidence 98.27% Date Thu Jan 5 12:30:23 GMT 2012 Rank 36 Aligned Residues 123 % Identity 18% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																													.									.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																													.									.	.	.
Template Sequence		D	L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	.	.	.	.	.	.	.	.	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	.	R	V	P	V	I	V	T	T	.	.	.	S	H	Y	S	T	Q	V	C	A	A
Template Known Secondary structure																T	T		S					.	.	.	.	.	.	.	.	S	S	G	G	G	T	G	G	G	S																	T	T	.	S	S							.	.	.			S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																													.									.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.														.	.	.	.
Query Sequence		R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	.	.	.	.	.	.	.	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A
Query Conservation																				.	.	.	.	.	.	.														.	.	.	.
Alig confidence																				.	.	.	.	.	.	.														.	.	.	.												.
Template Conservation																																																							.
Template Sequence		R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	.	S	G	T	A	L	S	A	P	F	L	A	R	M
Template Known Secondary structure									T	T		S							S		B	T	T	T	B																			S	S								G	G	.	G
Template Predicted Secondary structure																																																							.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions