Job Description P77541 Confidence 100.00% Date Thu Jan 5 12:30:23 GMT 2012 Rank 18 Aligned Residues 230 % Identity 16% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	A	F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	.	L	L	V	D	A
Query Conservation																																																																												.
Alig confidence																																							.																																					.
Template Conservation																																							.
Template Sequence		P	K	L	Q	A	M	R	E	A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	.	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L
Template Known Secondary structure										T	T										S										T	T		S					.		T	T					T	T			S	S	S	T	T																T			S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.											.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.											.	.	.	.
Template Sequence		P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	L	A	E	T	V	R	F	L	V	E	R	.	.	.	.	A	V	P	V	C	A	H	V	G	L	.	.	.	.	G
Template Known Secondary structure			T	T	S		S	S														T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G										T	.	.	.	.	T										.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.											.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																		.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.					.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																						.													.	.	.	.
Query SS confidence																																																						.													.	.	.	.
Query Sequence		L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	.	L	F	T	T	D	E	L	R	S	A	H	V	.	.	.	.	A	M	A	L	Y	P	L	S	A	F	R
Query Conservation																																																						.													.	.	.	.
Alig confidence																											.																											.													.	.	.	.
Template Conservation																											.
Template Sequence		A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	.	T	L	V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A	G	A	E	C	S	G	Q	V	L	V	L	H	D	M	L	G	V	F	P	G	K	R	P	R	F	V	K	D	F	M	Q	G	Q	P
Template Known Secondary structure																T		S						S			.												S	S						S	S		S		S	S										T	T			S	S				T	T				S	S	T	T		S
Template Predicted Secondary structure																											.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	F	A	A	V	E	A	Y	V	R	A	V	K	D	G	S	F	P	G	P	E	H
Template Known Secondary structure		S															T		S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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