Job Description P77541 Confidence 100.00% Date Thu Jan 5 12:30:23 GMT 2012 Rank 14 Aligned Residues 275 % Identity 28% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		H	S	P	G	K	A	F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	.	.	.	.	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		E	M	G	A	N	R	L	W	K	L	I	H	E	E	D	F	V	N	A	L	G	A	L	S	G	N	Q	A	M	Q	M	V	R	A	G	L	K	A	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q	S	L	Y	P	A	N	A	G	P	E	L	A	K	R	I	N	R	T	L	Q
Template Known Secondary structure															S	S						B		S	S										T	T		S															T	T		S				S	S	S		S		T	T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																																.	.	.	.	.	.	.
Template Conservation																																	.																																.	.	.	.	.	.	.
Template Sequence		R	A	D	Q	I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	I	V	A	D	A	E	A	G	F	G	.	G	P	L	D	A	F	E	I	M	K	A	Y	I	E	A	G	A	A	G	V	H	F	E	D	Q	L	A	S	G	K	V	.	.	.	.	.	.	.	L	I	P	T	A	A	H	I	R	N
Template Known Secondary structure											T	S			S	S	S		S									T	T	T	T	S	.	S															T		S						S	B							.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.																																.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.
		141	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																															.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	A	V	D	A	K	.	.	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E
Query Conservation										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																										.
Template Sequence		L	N	A	A	R	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	D	E	R	D	Q	P	F	V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A	R	A	I	A	Y	A	P	Y	.	C	D	L	I	W	M	E
Template Known Secondary structure													T											T	T	T					S				S	T	T	T	G	G	G	B		T	T	S		B		T	T	S				B			S												G	G	G	.		S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.
		189	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.														.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	T	.	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	A	E	H	V	Y	N	V	L
Query Conservation					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	K	P	D	L	A	Q	A	R	R	F	A	E	A	V	H	K	A	H	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	K	K	N	L	D	D	A	T	I	A	K	F	Q	R	E	L	G	A	M	G	Y	K	F	Q	F	I	T	L	A	G	F	H	Q	L	N	Y	G	M	F	E	L	A	R	G	Y
Template Known Secondary structure			S	S																	S	T	T									S	S	S						S															T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		255	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	E	G	T	Q	.	.	.	.	.	.	.	.	.	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	R	Q	M	A	A	Y	S	E	L	Q	Q	A	E	F	A	A	E	A	D	G	Y	T	A	T	K	H	Q	R	E	V	G	T	G	Y	F	D	A	V	S	L
Template Known Secondary structure					T															G	G	G	T			T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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