Job Description P77541 Confidence 96.34% Date Thu Jan 5 12:30:23 GMT 2012 Rank 140 Aligned Residues 217 % Identity 16% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.
Predicted Secondary structure																																					.	.	.	.																																							.
Query SS confidence																																					.	.	.	.																																							.
Query Sequence		L	H	S	P	G	K	A	F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	.	.	.	.	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	.	D	V
Query Conservation																																					.	.	.	.																																							.
Alig confidence																																					.	.	.	.																	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	V	K	G	N	E	I	L	L	K	A	H	K	E	G	Y	G	V	G	A	F	N	F	V	N	F	E	M	L	N	A	I	F	E	A	G	N	E	E	N	S	P	L	F	I	Q	A	S	E	G	A	I	K	Y	M	.	.	.	.	.	.	.	.	.	G	I	D	M	A	V	G	M	V	K	I	M	C	E	R	Y
Template Known Secondary structure		B														T									S	S															T																.	.	.	.	.	.	.	.	.																S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A
Query Conservation
Alig confidence																.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	I	P	V	A	L	H	L	D	H	G	T	T	.	.	.	.	.	.	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A
Template Known Secondary structure		T	T	S											S	.	.	.	.	.	.											T		S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S																			T	T
Template Predicted Secondary structure																.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.														.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		158	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Query SS confidence							.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Query Sequence		R	T	D	A	L	.	.	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	.	.
Query Conservation							.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Alig confidence							.	.										.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																.	.											.	.
Template Conservation																		.	.	.																																.																.	.
Template Sequence		E	L	G	R	L	M	G	I	L	V	N	P	K	E	A	E	.	.	.	Q	F	V	K	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K	L	D	.	F	E	R	L	Q	E	V	K	R	L	T	N	I	P	L	.	.	V	L	H	G	A	S	A	I	P	D	N	V
Template Known Secondary structure				S														.	.	.									S						S	S			S	S	S	B			S	S	S					.													S			.	.				S
Template Predicted Secondary structure																		.	.	.																																.																.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.
																					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	A	E	H	V	Y	N	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	S	Y	L	D	A	G	G	D	L	K	G	S	K	G	V	P	F	E	F	L	Q	E	S	V	K	G	G	I	N	K	V	N	T	D	T	D	L	R	I	A	F	I	A	E	V	R	K	V	A	N	E
Template Known Secondary structure								T	T				T	T		B														T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions