Job Description P77541 Confidence 97.42% Date Thu Jan 5 12:30:23 GMT 2012 Rank 90 Aligned Residues 134 % Identity 22% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Sequence		L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	.	.	.	.	.	.	.	G	G	C	C	G	.	.	.	.	.	.	.	.	T	T	P	E	H	V	K	L	F
Template Known Secondary structure		S														T	T			S																			T	T						T	T	T		S			.	.	.	.	.	.	.				T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.								260	.	.	.	.									.	.	.	.	.	270	.	.	.
		142	.	.	.	.	.	.	.																					150	.	.	.	.	.	.	.		.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		R	A	A	V	D	A	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	F	V	I	M	A	.	R	T	D	A	L	A	.	.	.	.	.	.	.	.	.	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	.	.	.	.
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.							.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		R	K	V	L	G	N	R	K	P	L	Q	R	K	K	K	R	I	F	A	V	S	S	P	S	K	L	V	T	F	D	H	F	V	V	I	G	E	R	I	N	P	A	G	R	K	K	L	W	A	E	M	Q	K	G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I
Template Known Secondary structure							S																	S	S					S	S	S											T	T										T	T															T	T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	Q	V	P	I	L	A	N
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L	S	L	D
Template Known Secondary structure		G	G	G	S																T		S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions