Job Description P77541 Confidence 95.95% Date Thu Jan 5 12:30:23 GMT 2012 Rank 169 Aligned Residues 184 % Identity 17% Template c3bo9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nitroalkan dioxygenase; PDBTitle: crystal structure of putative nitroalkan dioxygenase (tm0800) from2 thermotoga maritima at 2.71 a resolution Resolution 2.71 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		S	L	H	S	P	G	K	A	F	R	A	A	L	T	K	E	N	P	L	Q	.	.	.	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C
Query Conservation																						.	.	.
Alig confidence							.	.	.													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	R	T	R	.	.	.	V	T	D	L	L	E	I	E	H	P	I	L	X	G	G	X	A	W	A	G	T	P	T	L	A	A	A	V	S	E	A	G	G	L	G	I	I	G	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	K	P	D	D	L	R	K	A	I	S	E	L	R	Q	K	T
Template Known Secondary structure							.	.	.						T		S	S	S							T	T	T	S												T	S	B						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.				.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R
Query Conservation
Alig confidence																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		D	K	P	F	G	V	N	I	I	L	V	S	P	W	.	.	.	.	A	D	D	L	V	K	V	C	I	E	E	K	V	P	V	V	T	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	N	P	T	K	Y	I	R	E	L	K	.	.	.	.	.	E	N	G	T	K	V	I	P	V	V	A
Template Known Secondary structure		S	S								T	T	S	T	T	.	.	.	.											T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											.	.	.	.	.		T	T								S
Template Predicted Secondary structure																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	.	.	.	.	.	.	.	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	D	S	L	A	R	X	V	E	R	A	G	A	D	A	V	I	A	E	G	X	E	S	G	G	H	I	G	E	V	T	T	F	V	L	V	N	K	V	S	R	S	V	N	I	P	V	I	A	A	.	.	.	G	G	I	A	D	G	R	G	X	A	A	A	F	A	L	G
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.										T	T		S							T	T	S	S					S	S														S	S						.	.	.	S	S			S											T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template SS confidence
		121												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	M	A	L	Y	P	L	S	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	V	Q	X	G	T	R	F	V
Template Known Secondary structure			S					S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions