Job Description P77541 Confidence 93.38% Date Thu Jan 5 12:30:23 GMT 2012 Rank 272 Aligned Residues 232 % Identity 18% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																																														.	.	.	.	.											.
Query SS confidence																.	.	.	.	.																																														.	.	.	.	.											.
Query Sequence		A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	.	.	.	.	.	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	.	.	.	.	.	F	G	S	S	A	F	N	V	A	R	.
Query Conservation																.	.	.	.	.																																														.	.	.	.	.											.
Alig confidence																.	.	.	.	.												.	.	.	.	.	.	.	.	.																										.	.	.	.	.											.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		A	S	K	T	A	D	V	F	K	D	G	F	S	L	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	.	.	.	.	.	.	.	.	.	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N	Y	P	D	N	V	I	H	K
Template Known Secondary structure									T	T	T	S	S							T	T								T	S		.	.	.	.	.	.	.	.	.																S	S							B	G	G	G	B	T	S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620										.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	.	.	.	.	.	L	D	A	A	I	E	R	A
Query Conservation																																																																					.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	Q	E	S	A	K	A	G	I	D	V	F	R	I	F	D	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A
Template Known Secondary structure										T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G										T	T											S		T	T		T	T	T		S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.														.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.
Predicted Secondary structure																.	.	.																.	.	.	.																																						.	.
Query SS confidence																.	.	.																.	.	.	.																																						.	.
Query Sequence		Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	.	.	.	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	.	.	R	A	M	N	R
Query Conservation																.	.	.																.	.	.	.																																						.	.
Alig confidence																.	.	.																.	.	.	.																																						.	.
Template Conservation
Template Sequence		K	E	L	E	R	E	G	F	H	I	L	A	I	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I	D	T	A	V	A	S	M	S	G	L	T	S	Q	P
Template Known Secondary structure							T	T		S							T	T	S																T	T			S									T	T	S												T	T							B		G	G	G		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D	N	L	F	A	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		S	A	N	S	L	Y	Y	A	L	N	G	F	P	R	H	L	R	T	.	.	.	.	.	.	.	.	D	I	E	G	M	E	S	L	S	H	Y	W	S	T	V	R	T	Y	Y	S	D
Template Known Secondary structure		B								T	T	T	S	S	S		B		S	.	.	.	.	.	.	.	.																		T	T	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.									.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions