Job Description P77541 Confidence 95.90% Date Thu Jan 5 12:30:23 GMT 2012 Rank 172 Aligned Residues 232 % Identity 13% Template c3bg3B_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus) Resolution 2.80 Å

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		31	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.		.	100	.	.
Predicted Secondary structure									.	.																																																				.	.	.	.	.											.
Query SS confidence									.	.																																																				.	.	.	.	.											.
Query Sequence		A	L	L	A	Q	R	A	.	.	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	.	.	.	.	.	G	F	G	S	S	A	F	N	V	A	.	R	T	V	K
Query Conservation									.	.																																																				.	.	.	.	.											.
Alig confidence									.	.																									.	.	.	.	.	.																						.	.	.	.	.											.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		A	P	Y	V	A	H	N	F	S	K	L	F	S	M	E	N	W	G	G	A	T	F	D	V	A	M	R	F	L	Y	E	C	P	.	.	.	.	.	.	W	R	R	L	Q	E	L	R	E	L	I	P	N	I	P	F	Q	M	L	L	R	G	A	N	A	V	G	Y	T	N	Y	P	D	N	V	V	F	K	F	C	E
Template Known Secondary structure										T	T		S							T	T								T	S					.	.	.	.	.	.												S	S	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.							.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	.	.	.	.	.	.	.	L	A	V	E	G	L	D	A	A	I	E	R	A	Q
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.											.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		V	A	K	E	N	G	M	D	V	F	R	V	F	D	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	N	M	L	L	G	M	E	A	A	G	S	A	G	.	.	.	G	V	V	E	A	A	I	S	Y	T	G	D	V	A	D	P	S	R	T	K	Y	S	L	Q	Y	Y	M	G	L	A	E
Template Known Secondary structure					T	T	T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.																T	.	.	.											S		T	T		T	T			S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.														.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.				.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.
Predicted Secondary structure															.	.																.	.	.	.	.																																						.	.
Query SS confidence															.	.																.	.	.	.	.																																						.	.
Query Sequence		A	Y	V	E	A	G	A	E	M	L	F	P	E	.	.	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	.	.	R	A	M	N	R	A
Query Conservation															.	.																.	.	.	.	.																																						.	.
Alig confidence															.	.																.	.	.	.	.																																						.	.
Template Conservation
Template Sequence		E	L	V	R	A	G	T	H	I	L	C	I	D	M	A	G	L	L	K	P	T	A	C	T	M	L	V	S	S	L	R	D	R	F	P	D	L	P	L	H	I	H	T	H	D	T	S	G	A	G	V	A	A	M	L	A	C	A	Q	A	G	A	D	V	V	D	V	A	A	D	S	M	S	G	M	T	S	Q	P	S
Template Known Secondary structure							T		S						T	T																	T	T		T	T	S									T	T	S												T	T		S					B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D	N	L	F	A	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		M	G	A	L	V	A	C	T	R	G	T	P	L	D	T	E	V	.	.	.	.	.	.	.	.	P	M	E	R	V	F	D	Y	S	E	Y	W	E	G	A	R	G	L	Y	A	A
Template Known Secondary structure								T	T	T	T	S	T	T					.	.	.	.	.	.	.	.																		T	T	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.									.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions