Job Description P77541 Confidence 44.37% Date Thu Jan 5 12:30:23 GMT 2012 Rank 487 Aligned Residues 150 % Identity 17% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		A	F	R	A	A	L	T	K	E	N	P	L	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	.	.	.	.	.	C	S	L	P	L	L
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	.	.	.	.	.	.	.	.	.	.	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R
Template Known Secondary structure							S			S	S								S											T	T		S						.	.	.	.	.	.	.	.	.	.			S																									T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A
Query Conservation
Alig confidence										.																												.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation										.																												.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		F	S	A	E	D	T	F	R	.	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	.	.	.	.	.	.	.	.	.	.	.	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	.	G	P	R	V	D	I	E	F	H	G	H	N	D	T
Template Known Secondary structure					S	S	T	T	T	.	S													G	G	G		S							T	T	S	.	.	.	.	.	.	.	.	.	.	.																			.	T	T	T	S							B		T	T
Template Predicted Secondary structure										.																												.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		134	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		G	C	A	I	A	N	A	Y	.	.	.	.	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure		S								.	.	.	.					T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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