Job Description P77541 Confidence 92.09% Date Thu Jan 5 12:30:23 GMT 2012 Rank 297 Aligned Residues 131 % Identity 22% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A
Query Conservation
Alig confidence																																					.	.																			.										.	.	.	.
Template Conservation																																					.	.																			.										.	.	.	.
Template Sequence		F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	.	.	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	.	K	E	S	G	N	G	I	S	M	.	.	.	.	E	T	A	K	L	L	Y	S	Y	G	I
Template Known Secondary structure									T	T		S														S	S	S							T		.	.													S	S					.			S	S	S					.	.	.	.									T	T
Template Predicted Secondary structure																																					.	.																			.										.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.								.	.
Template Conservation								.	.	.	.	.	.	.	.																																																.	.	.	.	.								.	.
Template Sequence		K	N	F	D	T	S	.	.	.	.	.	.	.	.	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	.	.	.	.	.	P	D	S	F	L	V	G	.	.	S	G	G	I	R
Template Known Secondary structure								.	.	.	.	.	.	.	.		B	T	S	B													T	T		T								T	T	T		S		B												S	.	.	.	.	.	T	T						.	.		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																																.	.	.	.	.								.	.
Template SS confidence
		213	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.			.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		S	G	L	D	A	A	.	.	.	.	.	K	A	I	A	L	G	A	D	I	A	G	M
Template Known Secondary structure		S						.	.	.	.	.						T		S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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