 |
Job Description | P77541 | Confidence | 76.44% | Date | Thu Jan 5 12:30:23 GMT 2012 |
Rank | 405 | Aligned Residues | 112 |
% Identity | 21% | Template | c2yw3E_ |
PDB info |
PDB header:lyase | Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- |
PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1
|
Resolution | 1.67 Å |
|
 |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | S | A | F | N | V | A | R | T | V | K | S | M | I | K | A | G | A | A | G | L | H | I | E | D | Q | V | G | A | K | R | C | G | H | R | P | N | K | A | I | V | S | K | E | E | M | V | D | R | I | R | A | A | V | D | A | K | T | D | P | D | F | V | I | M | A | R | T | D | A | L | A | V | E | G | L | D | A | A |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |
|
|
|
|
| . | . | . | . |
|   |   |   |
|   |   |
Template Sequence |   |
V | R | G | G | E | D | L | L | G | L | A | R | V | L | E | E | E | G | V | G | A | L | E | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | T | E | K | G | L | E | A | L | K | A | L | R | K | . |
. |
. |
. |
S | G | L | L | L | G | A | G | T | . |
. |
. |
. |
V | R | S | P | K | E | A |
Template Known Secondary structure |   |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | S | S |
|  |  |  |  |
|
| . | . | . | . |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
. | . | . | . | . | . | . | . | . | |
|
|
|
70 | . | . | . | . | . | . |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | R | A | Q | A | Y | V | E | A | G | A | E | M | L | F | P | E | A | I | T | E | L | A | M | Y | R | Q | F | A | D | A | V | Q | V | P | I | L | A | N | I | T | E | F | G | A | T | P | L | F | T | T | D | E | L | R | S | A | H | V | A | M | A | L | Y | P | L |
Query Conservation |   |
|   |
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   | . | . | . | . | . |
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
. |
. |
. |
. |
E | A | A | L | E | A | G | A | A | F | L | V | S | P | G | L | L | . |
. |
E | E | V | A | A | L | A | Q | A | R | G | V | P | Y | L | P | G | V | L | T | P | . |
. |
. |
. |
. |
T | E | V | E | R | A | L | A | L | G | L | S | A | L | K | F | F | P |
Template Known Secondary structure |   |
. | . | . | . |  |  |  |  |  |  | T |
| S |  |  |  |  | S | S |
|
| . | . |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| S |  | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S |
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|