Job Description P77541 Confidence 97.05% Date Thu Jan 5 12:30:23 GMT 2012 Rank 113 Aligned Residues 201 % Identity 16% Template c2v5jB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PDBTitle: apo class ii aldolase hpch Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	F	R	A	A	L	T	K	E	N	P	L	.	.	Q	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A
Query Conservation														.	.
Alig confidence														.	.																												.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		S	F	K	A	A	L	K	A	G	R	P	Q	I	G	L	W	L	G	L	S	S	S	Y	S	A	E	L	L	A	G	A	G	F	D	W	L	L	I	D	G	E	.	.	.	.	.	.	.	.	.	.	.	H	A	P	N	N	V	Q	T	V	L	T	Q	L	Q	A	.	I	A	P	Y	P	S	Q	P	V	V	R	P
Template Known Secondary structure									T	T										S											T	S			S						T	T	.	.	.	.	.	.	.	.	.	.	.	T	S	S													.		T	T	S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	W	N	.	.	.	D	P	.	.	.	.	V	Q	I	K	Q	L	L	D	V	G	T	Q	T	L	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	V	Q	N	A	D	E	A	R	E	A	V	R	A	T	R	Y	P	P	A	G	I	R	G	V	G	S	A	L	A	R	A	S	R	W	N
Template Known Secondary structure		S	S	S	.	.	.			.	.	.	.									T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S											T	S		T	T	T					G	G	G	T	T	T	G	G	G	T	T	T
Template Predicted Secondary structure					.	.	.			.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.				.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence		.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	.	A	G	A	E	M	L	F	.	.	.	.	.	.	.	.	.	.	.	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	.
Query Conservation		.	.	.	.	.																																			.								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.													.								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		R	I	P	D	Y	L	Q	K	A	N	D	Q	M	C	V	L	V	Q	I	E	T	.	.	.	.	.	.	R	E	A	M	K	N	L	P	Q	I	L	D	V	E	G	V	D	G	V	F	I	G	P	A	D	L	S	A	D	M	G	Y	A	G	N	P	Q	H	P	E	V	Q	A	A	I	E	Q	A	I	V	Q	I	R
Template Known Secondary structure		T	S	T	T																	S	.	.	.	.	.	.						T						T	S	T	T															T	T	S	T	T				S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
				204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	A	M	N	R	A	A	E	H	V	Y	N	V	L	R
Query Conservation		.	.
Alig confidence		.	.												.	.	.	.	.																				.
Template Conservation															.	.	.	.	.																				.
Template Sequence		E	S	G	K	A	P	G	I	L	I	A	N	E	.	.	.	.	.	Q	L	A	K	R	Y	L	E	L	G	A	L	F	V	A	V	G	V	D	.	T	T	L	L	A	R	A	A	E	A	L	A	A	R	F	G
Template Known Secondary structure			T	T	S										.	.	.	.	.									T	T										.															T	T
Template Predicted Secondary structure															.	.	.	.	.																				.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions