Job Description P77541 Confidence 86.39% Date Thu Jan 5 12:30:23 GMT 2012 Rank 366 Aligned Residues 232 % Identity 16% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.
Predicted Secondary structure									.	.													.	.																																														.	.	.
Query SS confidence									.	.													.	.																																														.	.	.
Query Sequence		A	L	L	A	Q	R	A	.	.	G	Y	Q	A	I	Y	L	S	G	G	G	V	.	.	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	.	.	.	F	N	V	A	R	T	V	K	S
Query Conservation									.	.													.	.																																														.	.	.
Alig confidence									.	.													.	.										.	.	.	.	.																																.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		A	G	T	Y	S	H	A	L	P	N	L	L	S	L	E	C	W	G	G	A	T	F	D	V	S	M	R	F	L	T	E	D	.	.	.	.	.	P	W	E	R	L	A	L	I	R	E	G	A	P	N	L	L	L	Q	M	L	L	R	G	A	N	G	V	G	Y	T	N	Y	P	D	N	V	V	K	Y	F	V	R	Q
Template Known Secondary structure										T	T		S							T	T													.	.	.	.	.													T	T	S								T	T	T	B	T		S	S
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.						600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	.	.	.	.	.	.	.	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	K	G	G	I	D	L	F	R	V	F	D	C	L	N	W	V	E	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	S	M	D	A	I	A	E	E	N	K	L	C	E	A	A	I	C	Y	T	G	D	I	L	N	S	A	R	P	K	Y	D	L	K	Y	Y	T	N	L	A	V	E
Template Known Secondary structure						T									T	T			G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T											S		T	T		T	T	S	G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.																	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																	.	.	.	.																																						.	.
Query SS confidence													.	.																	.	.	.	.																																						.	.
Query Sequence		Y	V	E	A	G	A	E	M	L	F	P	.	.	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	.	.	R	A	M	N	R	A	A	E
Query Conservation													.	.																	.	.	.	.																																						.	.
Alig confidence													.	.																	.	.	.	.																																						.	.
Template Conservation
Template Sequence		L	E	K	A	G	A	H	I	I	A	V	D	M	A	G	L	L	K	P	A	A	A	K	V	L	F	K	A	L	R	E	A	T	G	L	P	I	H	F	H	T	H	D	T	S	G	I	A	A	A	T	V	L	A	A	V	E	A	G	V	D	A	V	D	A	A	M	D	A	L	S	G	N	T	S	Q	P	C	L	G
Template Known Secondary structure					T	T		S						T	T																				S	S								B	T	T	S												T	T		S					B		G	G	G		S	B	T	S			B
Template Predicted Secondary structure
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D	N	L	F	A
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		S	I	V	E	A	L	S	G	S	E	R	D	P	G	L	.	.	.	.	.	.	.	.	D	P	A	W	I	R	R	I	S	F	Y	W	E	A	V	R	N	Q	Y	A
Template Known Secondary structure								T	T	S	T	T					.	.	.	.	.	.	.	.																	G	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.									.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions