Job Description P77541 Confidence 96.29% Date Thu Jan 5 12:30:23 GMT 2012 Rank 144 Aligned Residues 185 % Identity 21% Template c2gjlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein pa1024; PDBTitle: crystal structure of 2-nitropropane dioxygenase Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		A	F	R	A	A	L	T	K	E	N	P	L	Q	.	.	.	I	V	G	T	I	N	A	N	H	A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D
Query Conservation															.	.	.
Alig confidence															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	T	E	T	F	G	V	E	H	P	I	M	Q	G	G	M	Q	W	V	G	R	A	E	M	A	A	A	V	A	N	A	G	G	L	A	T	L	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	P	S	P	E	A	L	A	A	E	I	A	R	C	R	E	L	T	D	R	P	F	G	V	N
Template Known Secondary structure								T		S	S	S							T	T	T		S										T	T	S	B					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	S																S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.											.	.	.	.	.	.
Template Sequence		L	T	L	L	P	T	Q	K	P	V	P	Y	A	E	Y	R	A	A	I	I	E	A	G	I	R	V	V	E	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	D	P	G	E	H	I	A	E	F	R	R	H	.	.	.	.	.	G	V	K	V	I	H	K	C	T	A	.	.	.	.	.	.
Template Known Secondary structure								S	S														T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S												T	.	.	.	.	.	T								S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	A	.	.	.	.	.	.	.	.	.	.	.	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation		.	.	.	.	.																																																				.	.	.
Template Sequence		.	.	.	.	.	V	R	H	A	L	K	A	E	R	L	G	V	D	A	V	S	I	D	G	F	E	C	A	G	H	P	G	E	D	D	I	P	G	L	V	L	L	P	A	A	A	N	R	L	R	V	P	I	I	A	S	.	.	.	G	G	F	A	D	G	R	G	L	V	A	A	L	A	L	G	A	D	A	I	N
Template Known Secondary structure		.	.	.	.	.										T	T		S							T	T		S	B				S	S													T	T			S						.	.	.	S	S			S											T		S
Template Predicted Secondary structure		.	.	.	.	.																																																				.	.	.
Template SS confidence
							128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	S	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	T	R	F	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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