Return to main results Retrieve Phyre Job Id

Job DescriptionP77541
Confidence93.59%DateThu Jan 5 12:30:23 GMT 2012
Rank266Aligned Residues126
% Identity21%Templatec2dx7B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150 .........160.. .......170.........180........
Predicted Secondary structure 















...


.........








Query SS confidence 





























. . .











. . . . . . . . .

























Query Sequence  KRCGHRPNKAIVSKEEMVDRIRAAVDAKTD. . . PDFVIMARTDAL. . . . . . . . . AVEGLDAAIERAQAYVEAGAEMLFPE
Query Conservation 
 

      

  
    

 

  
   ... 
  
 




 .........   





 

 

 




 


 
Alig confidence 





























...











.........

























Template Conservation 
 







  

      
     
  
      
         
              
      
   
 
 



Template Sequence  KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIMP
Template Known Secondary structure 


SSTS

SSGGGS


TTS

SS



T
S

Template Predicted Secondary structure 

























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   189190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 






















Query SS confidence 
































































Query Sequence  AITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNV
Query Conservation       
        
  

       
 

     

  

   
        

  
       
Alig confidence 



















.




......
































Template Conservation 



    
 
     



. 
   ......            





  
  
  
      
Template Sequence  ANTAHAFVEDIRKAIKIPII. SMIEE. . . . . . TAKKVKELGFKKAGLLATTGTIVSGVYEKEFSK
Template Known Secondary structure 
SGGGGG
SS
B
.
......TT
S

T
Template Predicted Secondary structure 






.
......






Template SS confidence 
































































   82.......90.........100. ..... ...110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions