Job Description P77541 Confidence 87.31% Date Thu Jan 5 12:30:23 GMT 2012 Rank 358 Aligned Residues 164 % Identity 10% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		67	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		V	L	T	D	I	R	R	I	T	D	.	.	.	.	.	.	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																.																								.	.	.	.	.
Template Conservation																																	.																								.	.	.	.	.
Template Sequence		F	V	K	F	I	N	E	K	I	K	Q	E	I	N	P	F	K	P	K	I	A	C	V	I	N	F	P	Y	G	T	D	.	S	M	E	K	V	L	N	D	T	E	K	A	L	D	D	G	A	D	E	I	D	L	V	.	.	.	.	.	I	N	Y	K	K	I	I	E	N	T	D	E	G	L	K	E	A	T	K	L
Template Known Secondary structure		G												S	S	S			S							S	T	T	T			S	.																T		S						.	.	.	.	.									S
Template Predicted Secondary structure																																	.																								.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.
Predicted Secondary structure																																							.									.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																							.									.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	.	V	E	A	G	A	E	M	L	.	.	.	.	.	F	P	E	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	Q	.	.	.	.	.	.	.	.	.	V
Query Conservation																																							.									.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.											.									.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K	T	.	.	.	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I	K	T	S	T	G	K	V	Q	I	N	A	T	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N
Template Known Secondary structure									T	T	T	S													S	.	.	.													T	T	T		S							S		S	S																							G	G	G	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	.	.	.	H	V	A	M	A	L	Y	P	L	S	A
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure		T	T							S	S			S																					S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions