Job Description P77541 Confidence 94.03% Date Thu Jan 5 12:30:23 GMT 2012 Rank 250 Aligned Residues 181 % Identity 11% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		A	R	T	V	K	S	M	I	K	A	G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	.	.	.	.	.	.	A	V	E	G	L	D	A	A	I
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																									.	.	.																																								.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	.	.	.	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A
Template Known Secondary structure											T	T		S								S			.	.	.							T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																			.	.	.																.	.	.	.	.																																							.	.
Query SS confidence																			.	.	.																.	.	.	.	.																																							.	.
Query Sequence		E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P	E	.	.	.	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	R	.	.
Query Conservation																			.	.	.																.	.	.	.	.																																							.	.
Alig confidence																			.	.	.																.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	V	F	D	A	S	V	G	G	L	G	G	C
Template Known Secondary structure											T		S							T	T	S																T	T	S		G	G	G						B		T	T	S													T							B	T	T			S		B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
								242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q	E	G	T	Q	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D	N	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		P	F	A	P	G	A	K	G	N	V	D	T	V	A	V	V	E	X	L	H	E	X	G	F	E	T	G	L	.	.	.	.	.	.	.	.	D	L	D	R	L	R	S	A	G	L	F	T	Q	A	L	R	Q	D
Template Known Secondary structure		T	T	B	T	T	S			B		B											T	T		B				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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