Job Description P77541 Confidence 94.38% Date Thu Jan 5 12:30:23 GMT 2012 Rank 236 Aligned Residues 236 % Identity 14% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		A	L	L	A	Q	R	A	G	Y	Q	A	I	Y	L	S	G	G	G	V	A	A	G	S	L	G	L	P	D	L	G	I	S	T	L	D	D	V	L	T	D	I	R	R	I	T	D	V	C	S	L	P	L	L	V	D	A	D	I	G	F	G	S	.	.	.	S	A	F	N	V	A	R	T	V	K	S	M	I	K	A
Query Conservation																																																																.	.	.
Alig confidence																																	.	.	.																													.	.	.
Template Conservation																																	.	.	.
Template Sequence		C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	.	.	.	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V	D	K	S	A	E	N
Template Known Secondary structure							T	S			S							T	T								T	S					.	.	.												T	T	S								G	G	G	T	T	S	S	S																	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	G	L	H	I	E	D	Q	V	G	A	K	R	C	G	H	R	P	N	K	A	I	V	S	K	E	E	M	V	D	R	I	R	A	A	V	D	A	K	T	D	P	D	F	V	I	M	A	R	T	D	A	L	A	V	E	G	L	D	A	A	I	E	R	A	Q	A	Y	V	E	A	G	A	E	M	L	F	P
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		G	M	D	V	F	R	V	F	D	A	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	.	.	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L
Template Known Secondary structure		T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.		T													T	T													T	T			.	.														T	T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130														.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		188				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																.	.	.	.	.	.																																						.	.
Query SS confidence			.	.	.																.	.	.	.	.	.																																						.	.
Query Sequence		E	.	.	.	A	I	T	E	L	A	M	Y	R	Q	F	A	D	A	V	.	.	.	.	.	.	Q	V	P	I	L	A	N	I	T	E	F	G	A	T	P	L	F	T	T	D	E	L	R	S	A	H	V	A	M	A	L	Y	P	L	S	A	F	.	.	R	A	M	N	R	A	A	E	H	V	Y	N	V	L	R	Q
Query Conservation			.	.	.																.	.	.	.	.	.																																						.	.
Alig confidence			.	.	.																.	.	.	.	.	.																																						.	.
Template Conservation
Template Sequence		K	D	M	A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V	D	T	A	I	S	S	M	S	L	G	P	G	H	N	P	T	E	S	V	A	E	M	L	E	G
Template Known Secondary structure				T	T																					T	T								B		T	T	S												T	T		S					B		G	G	G		S	T	T	S	B		B							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	T	Q	K	S	V	I	D	T	M	Q	T	R	N	E	L	Y	E	S	I	N	Y	Y	Q	Y	E	E	K	L	D	N	L	F	A	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		T	G	Y	T	T	N	L	.	.	.	.	.	.	.	.	D	Y	D	R	L	H	K	I	R	D	H	F	K	A	I	R	P	K	Y	K	K
Template Known Secondary structure		T	T						.	.	.	.	.	.	.	.																G	G	G	G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions