|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
. | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
Query Sequence |   |
H | S | P | G | K | A | F | R | A | A | L | T | K | E | . |
N | P | L | . |
. |
Q | I | V | G | T | I | N | A | N | H | A | L | L | A | Q | R | A | G | Y | Q | A | I | Y | L | S | G | G | G | V | A | A | G | S | L | G | L | P | D | L | G | I | S | T | L | D | D | V | L | T | D | I | R | R | I | T | D | . |
. |
V | C |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |
|   |   |   |   | . |   |   |   | . | . |   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . |   |
|
| . |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
G | N | L | R | Q | A | L | K | D | A | M | A | D | P | S | K | T | L | M | G | V | A | H | G | I | P | S | T | F | V | T | K | V | L | A | A | T | K | P | D | F | V | W | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | H | . |
G | M | F | N | R | L | E | L | H | D | A | I | H | A | A | Q | H | H | S | E | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |
|  |  |  |  |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | T | T | T | . | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
. | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | L | P | L | L | V | D | A | D | I | G | F | G | S | S | A | F | N | V | A | R | T | V | K | S | M | I | K | A | G | A | A | G | L | H | I | E | D | Q | V | G | A | K | R | C | G | H | R | P | N | K | A | I | V | S | K | E | E | M | V | D | R | I | R | A | A | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |
|
|
|   |   |   |
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |   |
Template Sequence |   |
R | S | L | V | I | V | R | V | P | K | H | D | . |
. |
. |
. |
. |
. |
. |
E | V | S | L | S | T | A | L | D | A | G | A | A | G | I | V | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | H | V | E | T | V | E | E | V | R | E | F | V | K | E | M | Y | Y | G | P | I | G | R | R | S | F | S | P | W |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
| T | T |
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |
|
|
|
|
|
| S | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 190 | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | T | D | P | D | F | V | I | M | A | R | T | D | A | L | A | V | E | G | L | D | A | A | I | E | R | A | Q | A | Y | V | E | . |
A | G | A | E | M | L | F | P | E | . |
. |
. |
. |
. |
. |
. |
. |
A | I | T | E | . |
. |
. |
. |
. |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |
| . |
|
|
|
|   |
|
|
|   | . | . | . | . | . | . | . | . |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|
|   | . | . | . | . | . | . |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |
|   |
Template Sequence |   |
T | F | S | P | G | I | A | D | A | S | L | F | P | N | D | P | Y | N | V | A | T | S | N | N | H | V | C | I | I | P | Q | I | E | S | V | . |
. |
. |
. |
. |
. |
K | G | V | E | N | V | D | A | I | A | A | M | P | E | I | H | G | L | M | F | G | P | G | D | Y | M | I | D | A | G | L | D | L | N | G | A | L | S | G |
Template Known Secondary structure |   |
T |
| B | T | T | T | B |
|
|
| S | S | T | T |
| T | T |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| S |  | . | . | . | . | . | . |  |  |  |  | T |  |  |  |  |  | T |
| T | T |
|
|
|  |  |  |
|  |  |  |  |  |  |  | T | T |
|
| T | T |
|
| T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | M | Y | R | Q | F | A | D | A | V | Q | V | P | I | L | A | N | I | T | E | F | G | A | T | P | L | F | T | T | D | E | L | R | S | A | H | V | A | M | A | L | Y | P | L | S | A | F | R | A | M | N | R | A | A | E | H | V | Y | N | V | L | R | Q | E |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   | . |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
V | P | H | P | T | F | V | E | A | M | T | K | F | S | T | A | A | Q | R | N | G | V | P | I | F | G | G | A | L | S | V | . |
. |
. |
. |
. |
D | M | V | P | S | L | I | E | Q | G | Y | R | A | I | A | V | Q | F | D | V | W | G | . |
L | S | R | L | V | H | G | S | L | A | Q | A | R | A | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S | G | . | . | . | . | . | G | G |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
  |