Return to main results Retrieve Phyre Job Id

Job DescriptionP77541
Confidence96.02%DateThu Jan 5 12:30:23 GMT 2012
Rank167Aligned Residues209
% Identity15%Templatec1izcA_
PDB info PDB header:lyaseChain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase; PDBTitle: crystal structure analysis of macrophomate synthase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10....... ..20 .........30.........40.........50.........60.........70...... ..
Predicted Secondary structure 



.
..


















..

Query SS confidence 













.


. .























































. .

Query Sequence  HSPGKAFRAALTKE. NPL. . QIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITD. . VC
Query Conservation     
  

 
    .   ..  
   
  



 
 


 

  

   

  

 

   

  

      
  ..  
Alig confidence 













.


..
























..........


.
















..

Template Conservation        

  
  
     
      

   
  
  
 
 
 

.......... 

.
          
 
       
Template Sequence  GNLRQALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWID. . . . . . . . . . VEH. GMFNRLELHDAIHAAQHHSEG
Template Known Secondary structure 


GGG

S

T

S..........TTT.S


TTT
Template Predicted Secondary structure 












..........


.







Template SS confidence 















































































   26...30.........40.........50.........60.........70 ... ......80.........90....
 
   7980.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 






























............
Query SS confidence 



































































. . . . . . . . . . . .
Query Sequence  SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVD. . . . . . . . . . . .
Query Conservation    




 
 


     
  

     


 

 



   
 

      

  
    

 

  ............
Alig confidence 











.......
















...............
















............
Template Conservation       



   .......   
   

 

 



...............
 
 
 


   
 
 



 
 

    
Template Sequence  RSLVIVRVPKHD. . . . . . . EVSLSTALDAGAAGIVI. . . . . . . . . . . . . . . PHVETVEEVREFVKEMYYGPIGRRSFSPW
Template Known Secondary structure 
S

TT
.......T
S...............TT


S
TTT





ST
Template Predicted Secondary structure 







.......



...............

















Template SS confidence 















































































   95....100...... ...110.........120... ......130.........140.........150..
 
   147..150.........160.........170......... 180........ .190..
Predicted Secondary structure  ...................









.




........



......
Query SS confidence  . . . . . . . . . . . . . . . . . . .
































.








. . . . . . . .



. . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . AKTDPDFVIMARTDALAVEGLDAAIERAQAYVE. AGAEMLFPE. . . . . . . . AITE. . . . . .
Query Conservation  ...................
    
  
 




    





 

 

 
.



 


 ........    ......
Alig confidence  ...................















......










.








........



......
Template Conservation      
            
   

    
   


 ...... 

 











 
 


 


 


 
     
 
Template Sequence  TFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV. . . . . . KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSG
Template Known Secondary structure  T
BTTTB


SSTT
TT


S......TT
TT



TT

TT

TTS
Template Predicted Secondary structure 




















......

















Template SS confidence 















































































   153......160.........170.........180....... ..190.........200.........210.........220......
 
   193......200.........210.........220.........230.........240.........250.......
Predicted Secondary structure  .........



















Query SS confidence  . . . . . . . . .
































































Query Sequence  . . . . . . . . . LAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQE
Query Conservation  ......... 
        
  

       
 

     

  

   
        

  
       
   
Alig confidence  .........





















.....





















.














Template Conservation     
 
  

  
  

   
   
      .....         
   
    
   .
       
   
  
Template Sequence  VPHPTFVEAMTKFSTAAQRNGVPIFGGALSV. . . . . DMVPSLIEQGYRAIAVQFDVWG. LSRLVHGSLAQARAS
Template Known Secondary structure 


TT


SSG.....GGTT.
Template Predicted Secondary structure 








.....




.
Template SS confidence 









































































   227..230.........240.........250....... ..260.........270......... 280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions