Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Q1
Confidence99.80%DateThu Jan 5 11:10:58 GMT 2012
Rank109Aligned Residues94
% Identity35%Templated1p2fa1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  FNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
Query Conservation                      
 

  
  

  
      
 

  
   
 
        

   
 


 

      
Alig confidence 






















































..






















Template Conservation    
    
     
      
 

  
  

  
       

   
   

   ..     
   
 





      
Template Sequence  DFGDLKIDATGFTVFLKGKRIHLPKKEFEILLFLAENAGKVVTREKLLETFWEDP. . VSPRVVDTVIKRIRKAIEDDPNR
Template Known Secondary structure  TTTTTTTT



TTTS

SS
..

T
SSTTS
Template Predicted Secondary structure 

















..





Template SS confidence 















































































   124.....130.........140.........150.........160.........170........ .180.........190.........200.
 
   219220.........230....
Predicted Secondary structure 








Query SS confidence 















Query Sequence  PEIIATIHGEGYRFCG
Query Conservation     
 



 

    
Alig confidence 















Template Conservation     
 

 
 

 
 
Template Sequence  PRYIKTIWGVGYXFTG
Template Known Secondary structure 
SSTTT

Template Predicted Secondary structure 










Template SS confidence 















   202.......210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions