Job Description P0A9Q1 Confidence 99.84% Date Thu Jan 5 11:10:58 GMT 2012 Rank 80 Aligned Residues 99 % Identity 28% Template d1opca_ SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 1.95

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	F	N	G	W	E	L	D	I	N	S	R	S	L	I	G	P	D	G	E	Q	Y	K	L	P	R	S	E	F	R	A	M	L	H	F	C	E	N	P	G	K	I	Q	S	R	A	E	L	L	K	K	M	T	G	R	E	L	K	P	H	D	R	T	V	D	V	T	I	R	R	I	R	K	H	F	E	S	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	F	G	K	F	K	L	N	L	G	T	R	E	M	F	R	E	D	E	P	M	P	L	T	S	G	E	F	A	V	L	K	A	L	V	S	H	P	R	E	P	L	S	R	D	K	L	M	N	L	A	R	G	R	E	Y	S	A	M	E	R	S	I	D	V	Q	I	S	R	L	R	R	M	V	E	E	D	P
Template Known Secondary structure						T	T					T	T	T	T					T	T																			S	T	T															S	S	S		T	T	S	S															S		T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	E	I	I	A	T	I	H	G	E	G	Y	R	F	C	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	P	R	Y	I	Q	T	V	W	G	L	G	Y	V	F	V	P	D
Template Known Secondary structure		T	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions