Job Description P0A9Q1 Confidence 22.77% Date Thu Jan 5 11:10:58 GMT 2012 Rank 360 Aligned Residues 128 % Identity 10% Template c3n0wA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		M	Q	T	P	H	I	L	I	V	E	D	E	.	.	.	.	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	V	F	E	A	T	.	.	.	.	.	.	.	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L
Query Conservation														.	.	.	.																							.	.	.	.	.	.	.
Alig confidence														.	.	.	.																							.	.	.	.	.	.	.																					.	.
Template Conservation																																																																			.	.
Template Sequence		K	G	Y	K	T	W	F	L	X	L	P	D	A	A	Y	G	D	L	X	N	A	A	I	R	R	E	L	T	A	G	G	G	Q	I	V	G	S	V	R	F	P	F	E	T	Q	D	F	S	S	Y	L	L	Q	A	K	A	S	G	A	Q	L	I	V	S	T	.	.	S	G	G	A	A	N	I	N	I	X	K	Q	A
Template Known Secondary structure		T	T										S	S																		T											T	T															T		S						.	.
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.
		70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		R	E	Q	A	N	V	A	.	.	L	M	F	L	T	G	R	D	N	E	V	D	K	I	L	G	L	E	I	G	A	D	D	Y	I	T	K	P	F	N	P	R	E	L	T	I	R	A	R	N	L	L	S	R	T	M	N	L	G	T	V	S	E	E
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		R	E	F	G	L	P	S	K	T	Q	K	V	G	G	X	I	D	I	L	T	D	V	K	S	A	G	L	R	V	X	Q	G	Q	E	Y	A	T	S	F	Y	W	N	X	D	D	R	T	R	A	F	A	K	R	F	Y	A	K	X	G	K	X	P	T
Template Known Secondary structure				T	T		S		S	S							B															T	T						S			T	T	S	S															S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions