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Job Description | P0A9Q1 | Confidence | 99.86% | Date | Thu Jan 5 11:10:58 GMT 2012 |
Rank | 61 | Aligned Residues | 116 |
% Identity | 22% | Template | c3b2nA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:uncharacterized protein q99uf4; |
PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus
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Resolution | 2.04 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | P | H | I | L | I | V | E | D | E | L | V | T | R | N | T | L | K | S | I | F | E | A | E | G | . |
Y | D | V | F | . |
E | A | T | D | G | A | E | M | H | Q | I | L | S | E | Y | D | I | N | L | V | I | M | D | I | N | L | P | G | K | N | G | L | L | L | A | R | E | L | R | E | . |
Q | A | N | V | A | L | M | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | T | S | L | I | I | A | E | D | Q | N | M | L | R | Q | A | M | V | Q | L | I | K | L | H | G | D | F | E | I | L | A | D | T | D | N | G | L | D | A | M | K | L | I | E | E | Y | N | P | N | V | V | I | L | D | I | E | M | P | G | M | T | G | L | E | V | L | A | E | I | R | K | K | H | L | N | I | K | V | I | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | T | G | R | D | N | E | V | D | K | I | L | G | L | E | I | G | A | D | D | Y | I | T | K | P | F | N | P | R | E | L | T | I | R | A | R | N | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | T | T | F | K | R | P | G | Y | F | E | K | A | V | V | N | D | V | D | A | Y | V | L | K | E | R | S | I | E | E | L | V | E | T | I | N | K | V | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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