 |
Job Description | P0A9Q1 | Confidence | 71.70% | Date | Thu Jan 5 11:10:58 GMT 2012 |
Rank | 193 | Aligned Residues | 98 |
% Identity | 13% | Template | c2jbmA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: qprtase structure from human
|
Resolution | 2.0 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | T | P | H | I | L | I | V | E | D | E | L | V | T | R | N | T | L | K | S | I | F | E | A | E | G | Y | D | V | F | E | A | T | D | G | A | E | M | H | Q | I | L | S | E | Y | D | I | N | L | V | I | M | D | I | N | L | P | G | K | N | G | L | L | L | A | R | E | L | R | E | Q | A | N | V | A | L | M | F | L |
Query Conservation |   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |
| . |
|
|   |
|   |
|
| . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
Template Sequence |   |
V | K | D | N | H | V | V | A | A | G | G | V | E | K | A | V | R | A | A | R | Q | A | A | D | F | A | L | K | V | E | V | E | C | S | S | L | Q | E | A | V | Q | A | A | E | A | G | . |
A | D | L | V | L | L | D | . |
N | F | K | P | E | E | L | H | P | T | A | T | V | L | K | A | Q | F | P | S | V | A | V | E | A |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |  | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | R | D | N | E | V | D | K | I | L | G | L | E | I | G | A | D | D | Y |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
S | G | G | I | T | L | D | N | L | P | Q | F | C | G | P | H | I | D | V | I |
Template Known Secondary structure |   |
 | S | S |
|
| T | T | T |  |  |  |  |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|