 |
Job Description | P0A9Q1 | Confidence | 23.17% | Date | Thu Jan 5 11:10:58 GMT 2012 |
Rank | 355 | Aligned Residues | 50 |
% Identity | 20% | Template | c2hteB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:spermidine synthase; |
PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine
|
Resolution | 2.00 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | L | I | V | E | D | E | L | V | T | R | N | T | L | K | S | I | F | E | A | . |
. |
. |
. |
. |
E | G | Y | D | V | F | . |
E | A | T | D | G | A | E | M | H | Q | I | L | S | E | Y | D | I | N | L | V | I | M | D | I |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . |   |
|   |   |
|   | . |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   | . |   |   |   |   |
|
|   |
|
|   |
|   |
Template Sequence |   |
N | I | D | I | C | E | I | D | E | T | V | I | E | V | S | K | I | Y | F | K | N | I | S | C | G | Y | E | D | K | R | V | N | V | F | I | E | D | A | S | K | F | L | E | N | . |
V | T | N | T | Y | D | V | I | I | V | D | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | G | G | G | G | S | T | T |  |  |  |  |  | S |
|  |  |  |  |  |  | T | . |
|
| S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|