 |
Job Description | P0A9Q1 | Confidence | 94.47% | Date | Thu Jan 5 11:10:58 GMT 2012 |
Rank | 151 | Aligned Residues | 44 |
% Identity | 18% | Template | c1x3uA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulatory protein fixj; |
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
|
Resolution | UNK |
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | R | S | E | F | R | A | M | L | H | F | C | E | N | P | G | K | I | Q | S | R | A | E | L | L | K | K | M | T | G | R | E | L | K | P | H | D | R | T | V | D | V | T | I | R | R | I | R | K | H | F | E |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
| . | . | . | . |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
L | S | E | R | E | R | Q | V | L | S | A | V | V | A | G | . |
. |
. |
. |
L | P | N | K | S | I | A | Y | D | L | . |
. |
. |
. |
. |
D | I | S | P | R | T | V | E | V | H | R | A | N | V | M | A | K | M | K |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . |
|
|  |  |  |  |  |  |  | T | . | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
. | . | . | 160 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|