 |
Job Description | P07118 | Confidence | 64.02% | Date | Thu Jan 5 11:00:14 GMT 2012 |
Rank | 102 | Aligned Residues | 107 |
% Identity | 14% | Template | d1iq0a1 |
SCOP info | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
|
Resolution | 2.30 |
|
 |
  |   |
648 | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 720 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
A | S | R | F | V | L | M | N | T | E | G | Q | D | C | G | F | N | G | G | E | M | T | L | S | L | A | D | R | W | I | L | A | E | F | N | Q | T | I | K | A | Y | R | E | A | L | D | S | F | R | F | D | I | A | A | G | I | L | Y | E | F | T | W | N | Q | F | C | D | W | Y | . |
. |
. |
. |
. |
L | E | L | T | K | P |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
| . | . | . | . | . |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
| . |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
A | H | A | R | A | H | S | I | L | R | K | A | G | E | W | G | A | P | D | L | S | Q | A | T | P | Y | E | R | A | L | A | L | D | L | L | D | F | E | E | A | V | L | E | A | A | E | E | R | T | P | H | V | L | A | Q | Y | L | L | D | L | A | . |
A | S | W | N | A | Y | Y | N | A | R | E | N | G | Q | P | A | T | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|  |  | T | T |  |  | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | |
. | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . |
  |
  |   |
723 | . | . | . | . | . | . | |
|
730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | N | G | G | T | E | . |
. |
A | E | L | R | G | T | R | H | T | L | V | T | V | L | E | G | L | L | R | L | A | H | P | I | I | P |
Query Conservation |   |
  |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|
|   |   |   |
Template Sequence |   |
V | L | T | A | P | E | G | L | R | E | L | R | L | S | L | V | Q | S | L | Q | R | T | L | A | T | G | L | D | L | L | G | I | P | A | P |
Template Known Secondary structure |   |
S | T | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
555 | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|