Job Description P07118 Confidence 100.00% Date Thu Jan 5 11:00:14 GMT 2012 Rank 33 Aligned Residues 174 % Identity 26% Template c3o0aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:leucyl-trna synthetase subunit alpha; PDBTitle: crystal structure of the wild type cp1 hydrolitic domain from aquifex2 aeolicus leucyl-trna Resolution 1.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	A	I	S	D	L	E	V	E	N	R	E	S	K	G	S	M	W	H	I	R	Y	P	L	A	D	G	A	K	T	A	D	G	K	D	Y	L	V	V	A	T	T	R	P	E	T	L	L	G	D	T	G	V	A	V	N	P	E	D	P	R	Y	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		E	G	A	L	I	R	F	Y	V	E	I	E	E	P	E	K	F	L	N	C	V	P	E	E	L	K	E	T	L	L	K	.	E	K	R	I	Y	I	D	V	F	T	T	R	P	D	T	V	F	G	A	T	F	V	V	L	A	P	E	H	P	L	V	P	V	L	A	C	I	G	E	R	L	G	N	A	C	Y	S	D
Template Known Secondary structure													S		G	G	G	T	G	G	G	S											.		S									S		G	G	G	G	G	G								T	T		T													T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
																											245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	K	Y	V	I	L	P	L	V	N	R	R	I	P	I	V	G	D	E	H	A	D	M	E	K	G	T	G	C	V	K	I	T	P	A	H	D	F	N	D	Y	E	V	G	K	R	H	A	L	P	M	I	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	N	F	V	E	K	M	K	K	M	S	T	R	E	R	T	M	E	E	D	K	E	G	V	F	L	G	V	Y	A	T	N	P	A	N	G	E	K	I	P	V	W	S	A	N	Y	V	L	Y	E	Y	G	T	G	A	I	M	C	V	P	A	H	D	Q	R	D	W	E	F	A	K	K	Y	D	L	P	I	K	V
Template Known Secondary structure											T	S							S		S	S													T	T	T										T	T	S		T	T	S	T	T	S						T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	T	F	D	G	D	I	R	E	S	A	Q	V	F	D	T	K	G	N	E	S	D	V	Y	S	S	E	I	P	A	E	F	Q	K	L	E	R	F	A	A	R	K	A	V	V	A	A	V	D	A	L	G	L	L	E	E	I	K	P	H
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		V	V	K	P	E	G	A	W	D	F	E	K	G	A	Y	E	G	K	.	.	.	.	.	.	G	T	L	V	N	S	D	G	F	D	G	L	D	S	E	T	A	K	R	K	I	T	E	W	L	Q	D	R	G	L	G	E	K	K	V	S	Y
Template Known Secondary structure						S	S				T	T	T					S		.	.	.	.	.	.					S		G	G	G	T	T		B															T	T	S					S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.							.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions