Job Description P07118 Confidence 99.97% Date Thu Jan 5 11:00:14 GMT 2012 Rank 38 Aligned Residues 174 % Identity 25% Template c2wfgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:cytosolic leucyl-trna synthetase; PDBTitle: structure of the candida albicans cytosolic leucyl-trna2 synthetase editing domain bound to a benzoxaborole-amp3 adduct Resolution 2.20 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	I	S	D	L	E	V	E	N	R	E	S	K	G	S	M	W	H	I	R	Y	P	L	A	D	G	A	K	T	A	D	G	K	D	Y	L	V	V	A	T	T	R	P	E	T	L	L	G	D	T	G	V	A	V	N	P	E	D	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		V	G	I	K	I	R	L	T	D	V	A	P	Q	A	Q	E	L	F	K	K	E	S	L	D	V	K	E	.	.	.	.	.	N	K	V	Y	L	V	A	A	T	L	R	P	E	T	M	Y	G	Q	T	C	C	F	V	S	P	K	I	D	Y	G	V	F	D	A	G	N	G	D	Y	F	I	T	T	E	R	A	F	K
Template Known Secondary structure																						T	T			T	T	T	.	.	.	.	.	S									S		G	G	G	G	G	G								T	T									S	T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
																							242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	D	L	I	G	K	Y	V	I	L	P	L	.	V	N	R	R	I	P	I	V	G	D	E	H	A	D	M	E	K	G	T	G	C	V	K	I	T	P	A	H	D	F	N	D	Y	E	V	G	K	R	H	A	L	P	M	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																												.	.
Template Conservation
Template Sequence		N	M	S	F	Q	N	L	T	P	K	R	G	Y	Y	K	P	L	F	T	I	N	G	K	T	L	I	G	S	R	I	D	A	P	Y	A	V	N	K	N	L	R	V	L	P	M	E	T	V	L	A	T	K	G	T	G	V	V	T	C	V	P	S	D	S	P	D	D	F	V	T	T	R	D	L	A	N	K	P	E	Y
Template Known Secondary structure				T	T	T	T		S	S	S	T	T					S									T	T						T	T		S	S		S							T	T			T	T	S	T	T	S						T	T	T														S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
																298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	I	L	T	F	D	G	D	I	R	E	S	A	Q	V	F	D	T	K	G	N	E	S	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	S	E	I	P	A	E	F	Q	K	L	E	R	F	A	A	R	K	A	V	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	I	E	K	D	W	V	Q	T	D	I	V	P	I	V	H	T	E	K	Y	G	D	K	C	A	E	F	L	V	N	D	L	K	I	Q	S	P	K	D	S	V	Q	L	A	N	A	K	E	L	A	Y	K	E	G	F	Y	N	G	T	M	L	I	G	K	Y	K	G	D	K	V	E	D	A	K	P	K	V	K	Q
Template Known Secondary structure		T	T			G	G	G											B	T	T	T	B	T										T	T			S	T	T																								S	S	T	T	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	A	L	G	L	L	E	E	I	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	I	D	E	G	L	A	F	V	Y	N	E
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions