Job Description P07118 Confidence 96.09% Date Thu Jan 5 11:00:14 GMT 2012 Rank 69 Aligned Residues 144 % Identity 15% Template c2j5bA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol Resolution 2.20 Å

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		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.			.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.										.
Query SS confidence																																																							.	.										.
Query Sequence		H	P	T	S	V	M	V	S	G	F	D	I	I	F	F	W	I	A	R	M	I	M	M	T	M	H	F	I	K	D	E	N	G	K	P	Q	V	P	F	H	T	V	Y	M	T	G	L	I	R	D	D	E	G	.	.	Q	K	M	S	K	S	K	G	N	.	V	I	D	P	L	D	M	V	D	G	I	S	L	P	E
Query Conservation																																																							.	.										.
Alig confidence														.															.	.	.	.	.	.	.	.																			.	.										.								.	.	.	.	.	.	.	.
Template Conservation														.															.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Sequence		E	G	I	D	I	C	Q	L	G	I	D	Q	.	R	K	V	N	M	L	A	I	E	Y	A	N	D	R	.	.	.	.	.	.	.	.	G	L	K	I	P	I	S	L	S	H	H	M	L	M	S	L	S	G	P	K	K	K	M	S	K	S	D	P	Q	G	A	I	F	M	D	D	T	.	.	.	.	.	.	.	.
Template Known Secondary structure		T			S					B	G	G	G	.														T	.	.	.	.	.	.	.	.	T									B						T	T		S	S				S	T	T		G	G	G	S		B	T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.															.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	K	R	T	G	N	M	M	Q	P	Q	L	A	D	K	I	R	K	R	T	E	K	Q	F	P	N	G	I	E	P	H	G	T	D	A	L	R	F	T	L	A	A	L	A	S	T	G	R	D	I	N	W	D	M	K	R	L	E	G	Y	R	N	F	C	N	K	L	W	N	A	S	R	F	V	L	M	N	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	E	V	S	E	K	I	S	R	A	Y	C	T	D	E	T	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	I	F	E	Y	I	K	Y	L	L	L	R	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S				S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.														.	.	.	260	.	.	.	.	.	.	.	.	.	270
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.													.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	Q	D	C	G	F	N	G	G	E	M	T	L	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	D	R	W	I	L	A	E	F	N	Q	T	I	K	A	Y	R	E	A	L	D	S	F	R	F	D	I	A	A	G	I	L	Y	E	F
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	T	L	N	L	C	G	K	I	Y	T	D	I	E	S	I	Q	E	D	F	S	S	M	N	K	R	E	L	K	T	D	V	A	N	Y	I	N	T	I	I	D	L	V	R	E	H	F	K	K	P	E	L	S	E	L	L	S	N	V	K	S	Y
Template Known Secondary structure			S					T	T				S	S									T	T	S																								T	T	S	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions