 |
Job Description | P07118 | Confidence | 96.81% | Date | Thu Jan 5 11:00:14 GMT 2012 |
Rank | 64 | Aligned Residues | 60 |
% Identity | 25% | Template | c2cybA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:tyrosyl-trna synthetase; |
PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus
|
Resolution | 1.80 Å |
|
 |
  |   |
499 | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | H | P | T | S | V | M | V | S | G | F | D | I | I | F | F | W | I | A | R | M | I | M | M | T | M | H | F | I | K | D | E | N | G | K | P | Q | V | P | F | H | T | V | Y | M | T | G | L | I | R | D | D | E | G | Q | K | M | S | K | S | K | G | N | V | I | D | P | L | D |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
H | L | G | V | D | L | A | V | G | G | I | D | Q | R | K | I | H | M | L | A | R | E | N | L | P | R | L | G | Y | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | C | L | H | T | P | I | L | V | G | L | D | G | Q | K | M | S | S | S | K | G | N | Y | I | S | V | R | D |
Template Known Secondary structure |   |
 | T | T |
| S |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
| B |
| T | T | S | S | B |
|
| T | T | T | T |
| S |
| B | T | T |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|