Return to main results Retrieve Phyre Job Id

Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank85Aligned Residues239
% Identity27%Templated1zk4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
Query Conservation 








 


 
 
  
   

 

   
                                                
Alig confidence 
















































..




























Template Conservation 
 










 
 
  

  

 

   
                 ..      
                      
Template Sequence  KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ. . IQFFQHDSSDEDGWTKLFDATEKAFGPVS
Template Known Secondary structure 
TTTTSTT
S


TTT..

TT
SS

Template Predicted Secondary structure 













..




















Template SS confidence 















































































   7..10.........20.........30.........40.........50..... ....60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
Query Conservation                                                              
             
  

 
Alig confidence 








































....


































Template Conservation                                           ....                
               
  
Template Sequence  TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI. . . . QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG
Template Known Secondary structure 








TTT

T....TTSSS


GGGTS

TT
Template Predicted Secondary structure 
































....






















Template SS confidence 















































































   85....90.........100.........110.........120..... ....130.........140.........150.........160
 
   162.......170..... ....180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 
..




































Query SS confidence 













. .































































Query Sequence  AIDTLTTGLSLEVA. . AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGS
Query Conservation           
    ..   
 

 
 

 
 
                   

 
   
 


  
  


  
  


 
Alig confidence 













..































































Template Conservation           
         
 
  
 

   
                   
  
   




  
  
 
  
  


 
Template Sequence  AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGS
Template Known Secondary structure  TT
S

B

TSTTTSTTT
TTSS
B
SGGGTT

S
Template Predicted Secondary structure 

































Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   240......
Predicted Secondary structure 



Query SS confidence 






Query Sequence  FIDLAGG
Query Conservation   
 



Alig confidence 






Template Conservation   
 



Template Sequence  EFVVDGG
Template Known Secondary structure  STT
Template Predicted Secondary structure 


Template SS confidence 






   241......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions