Job Description P52037 Confidence 100.00% Date Thu Jan 5 12:04:56 GMT 2012 Rank 56 Aligned Residues 237 % Identity 26% Template c3uf0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy) Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	L	V	T	G	G	S	R	G	I	G	R	A	T	A	L	L	L	A	Q	E	G	Y	T	V	A	V	N	Y	Q	Q	N	L	H	A	A	Q	E	V	M	N	L	I	T	Q	A	G	G	K	A	F	V	L	Q	A	D	I	S	D	E	N	Q	V	V	A	M	F	T	A	I	D	Q	H	D	E	P	L	A
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		R	T	A	V	V	T	G	A	G	S	G	I	G	R	A	I	A	H	G	Y	A	R	A	G	A	H	V	L	A	W	G	R	T	.	.	D	G	V	K	E	V	A	D	E	I	A	D	G	G	G	S	A	E	A	V	V	A	D	L	A	D	L	E	G	A	A	N	V	A	E	E	L	A	A	T	R	R	V	D	V
Template Known Secondary structure								T	T	T	S													T	T								S	S	.	.	T											T	T	T										T	T																S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	N	N	A	G	I	L	F	T	Q	C	T	V	E	N	L	T	A	E	R	I	N	R	V	L	S	T	N	V	T	G	Y	F	L	C	C	R	E	A	V	K	R	M	A	L	K	N	G	G	S	G	G	A	I	V	N	V	S	S	V	A	S	R	L	G	S	P	G	E	Y	V	D	Y	A	A	S	K	G
Query Conservation
Alig confidence												.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	V	N	N	A	G	I	I	A	R	.	.	.	.	.	.	A	P	A	E	E	V	S	L	G	R	W	R	E	V	L	T	V	N	L	D	A	A	W	V	L	S	R	S	F	G	T	A	M	L	A	H	G	S	G	R	I	V	T	I	A	S	M	L	S	F	Q	G	G	R	N	V	A	A	Y	A	A	S	K	H
Template Known Secondary structure												.	.	.	.	.	.			G	G	G														T																		T										G	G	G	T	S			S	S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	I	D	T	L	T	T	G	L	S	L	E	V	A	A	Q	G	I	R	V	N	C	V	R	P	G	F	I	Y	T	E	M	H	A	.	S	G	G	E	P	G	R	V	D	R	V	K	S	N	I	P	M	Q	R	G	G	Q	A	E	E	V	A	Q	A	I	V	W	L	L	S	D	K	A	S	Y	V	T	G	S	F
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		A	V	V	G	L	T	R	A	L	A	S	E	W	A	G	R	G	V	G	V	N	A	L	A	P	G	Y	V	V	T	A	N	T	A	A	L	R	A	D	D	E	R	A	A	E	I	T	A	R	I	P	A	G	R	W	A	T	P	E	D	M	V	G	P	A	V	F	L	A	S	D	A	A	S	Y	V	H	G	Q	V
Template Known Secondary structure															G	G	G	T										S	B		S	G	G	G					T	S											S	T	T	S	S		B		G	G	G	G									S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		241	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	L	A	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	D	G	G
Template Known Secondary structure					S	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions