Return to main results Retrieve Phyre Job Id

Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank110Aligned Residues232
% Identity23%Templatec3tl3A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: structure of a short-chain type dehydrogenase/reductase from2 mycobacterium ulcerans
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
Query Conservation 








 


 
 
  
   

 

   
                                                
Alig confidence 








































.......































Template Conservation   







 


 


  

  
  

   
         .......         
                      
Template Sequence  AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL. . . . . . . GDRARFAAADVTDEAAVASALDLAETMGTLRI
Template Known Secondary structure 
TTTST
SS
T.......
TT

TT
S
Template Predicted Secondary structure 










.......


















Template SS confidence 















































































   6...10.........20.........30.........40...... ...50.........60.........70........
 
   82.... ...90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 




..





















































Query SS confidence 




. .








































































Query Sequence  ALVNN. . AGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAAS
Query Conservation       ..                                                       
             
  
Alig confidence 




..








































































Template Conservation                                                                                

Template Sequence  VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVNAEERGVIINTASVADGQIGQAAYSAS
Template Known Secondary structure 
GGGST


STTS






S





Template Predicted Secondary structure 










































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   160.........170.........180.........190.........200.........210.. .......220.........230........
Predicted Secondary structure 

























.










Query SS confidence 




















































.

























Query Sequence  KGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPM. QRGGQAEEVAQAIVWLLSDKASYVTG
Query Conservation 
          
       
 

 
 

 
 
                   

. 
   
 


  
  


  
  


Alig confidence 



































....












.


















..




Template Conservation 
            
     
 
  
 

 
 
    ....               
   




  
  
 
 ..  


Template Sequence  KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLP. . . . EEARASLGKQVPHPSRLGNPDEYGALAVHIIEN. . PMLNG
Template Known Secondary structure  GGGT
SB

TT

....TSSSS
S
B

..TT

S
Template Predicted Secondary structure 































....











..




Template SS confidence 















































































   163......170.........180.........190........ .200.........210.........220.........230. .....
 
   239240......
Predicted Secondary structure 




Query SS confidence 







Query Sequence  SFIDLAGG
Query Conservation    
 



Alig confidence 







Template Conservation    
 



Template Sequence  EVIRLDGA
Template Known Secondary structure 
STT
Template Predicted Secondary structure 



Template SS confidence 







   240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions