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Job DescriptionP52037
Confidence100.00%DateThu Jan 5 12:04:56 GMT 2012
Rank127Aligned Residues225
% Identity31%Templatec3qljB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30...... ...40.........50.........60.........70..
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Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL. . . . . . . . . HAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTA
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Template Sequence  RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT
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TTTTSTT



B
TTSSBT
TTSTT




TTS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   73......80.........90.........100.........110......... 120.........130.........140.........150.
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Query Sequence  IDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCC. REAVKRMALKNGGSGGAIVNVSSVASRLGSPG
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Template Sequence  AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV
Template Known Secondary structure  S










B
GGG

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BT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSD
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Template Sequence  GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSA. . . . . . . . . . . . . . . . . . . . . RTRFDAMAPENVSPLVVWLGSA
Template Known Secondary structure  TBGGGT
T.....................T



TT
GGGTTSG
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   167..170.........180.........190.........200... ......210.........220.....
 
   232.......240.......
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Query Sequence  KASYVTGSFIDLAGGK
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Template Sequence  EARDVTGKVFEVEGGK
Template Known Secondary structure  GGTT

S
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   242.......250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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