Return to main results Retrieve Phyre Job Id

Job DescriptionP52037
Confidence99.97%DateThu Jan 5 12:04:56 GMT 2012
Rank151Aligned Residues236
% Identity27%Templatec3m1aF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative dehydrogenase; PDBTitle: the crystal structure of a short-chain dehydrogenase from2 streptomyces avermitilis to 2a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA
Query Conservation 








 


 
 
  
   

 

   
                                                
Alig confidence 



































....







































Template Conservation 








 


 


  
   
  

   
    ....       
                                
Template Sequence  KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA. . . . LDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD
Template Known Secondary structure 
TTTTSTT
SSGGG....G
TTT

TT
S

S
Template Predicted Secondary structure 








....











Template SS confidence 















































































   6...10.........20.........30.........40. ........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKG
Query Conservation                                                              
             
  

 
Alig confidence 















































.....


























Template Conservation                                                  .....        
                  
Template Sequence  VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQXRERG. . . . . SGSVVNISSFGGQLSFAGFSAYSATKA
Template Known Secondary structure 





GGG

TT.....


GGGT


TT
Template Predicted Secondary structure 





























.....


















Template SS confidence 















































































   82.......90.........100.........110.........120......... 130.........140.........150......
 
   162.......170.........180.........190......... 200.........210.........220......
Predicted Secondary structure 





















.......








........
Query SS confidence 





































. . . . . . .


























. . . . . . . .
Query Sequence  AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE. . . . . . . PGRVDRVKSNIPMQRGGQAEEVAQAIV. . . . . . . .
Query Conservation           
       
 

 
 

 
 
        .......           

 
   
 


  
 ........
Alig confidence 





































.......


























........
Template Conservation                   
 
    

 
 
                          

 
   
 


 

         
Template Sequence  ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQQPGDPAKAAAAIRLALDTEKT
Template Known Secondary structure  GGGT

B

TTT







TTT


B
TSSS
Template Predicted Secondary structure 
































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   227..230.........240......
Predicted Secondary structure  ....










Query SS confidence  . . . .



















Query Sequence  . . . . WLLSDKASYVTGSFIDLAGG
Query Conservation  .... 


  
  


  
 



Alig confidence  ....



















Template Conservation      

 
  
  


  
 



Template Sequence  PLRLALGGDAVDFLTGHLDSVRAE
Template Known Secondary structure 
SS
Template Predicted Secondary structure 











Template SS confidence 























   242.......250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions