Job Description P52037 Confidence 98.44% Date Thu Jan 5 12:04:56 GMT 2012 Rank 247 Aligned Residues 236 % Identity 11% Template c3lu1C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:wbgu; PDBTitle: crystal structure analysis of wbgu: a udp-galnac 4-epimerase Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	L	V	T	G	G	S	R	G	I	G	R	A	T	A	L	L	L	A	Q	E	G	Y	T	V	A	V	N	Y	Q	Q	N	L	H	A	A	Q	E	V	M	N	L	I	T	Q	A	G	G	K	A	F	V	L	Q	A	D	I	S	D	E	N	Q	V	V	A	M	F	T	A	I	D	Q	H	D	E	P	L	A
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	T	W	L	I	T	G	V	A	G	F	I	G	S	N	L	L	E	K	L	L	K	L	N	Q	V	V	I	G	L	D	N	F	S	T	G	H	Q	Y	N	L	D	E	V	K	T	L	V	S	T	E	Q	W	S	R	F	C	F	I	E	G	D	I	R	D	L	T	T	C	E	Q	V	M	K	G	V	.	.	.	.
Template Known Secondary structure								T	T	T	S													T	T									S	S	S													S						T	T								T	T								T	T	T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	N	N	A	G	I	L	F	T	Q	C	T	V	E	N	L	T	A	E	R	I	N	R	V	L	S	T	N	V	T	G	Y	F	L	C	C	R	E	A	V	K	R	M	A	L	K	N	G	G	S	G	G	A	I	V	N	V	S	S	V	A	S	R	L	G	S	P	G	E	Y	V	D	Y	A	A	S	K	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	H	V	L	H	Q	A	A	L	G	S	V	P	R	S	I	V	D	P	I	T	T	N	A	T	N	I	T	G	F	L	N	I	L	H	A	A	K	N	A	Q	V	Q	S	F	T	Y	A	A	S	S	S	T	Y	G	D	H	P	A	L	P	K	V	E	E	N	I	G	N	P	L	S	P	Y	A	V	T	K	Y
Template Known Secondary structure		.	S																										T														T		S								G	G	G	G	T	T				S	S	B		T	T							S
Template Predicted Secondary structure		.
Template SS confidence
			93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		A	I	D	T	L	T	T	G	L	S	L	E	V	A	A	Q	G	I	R	V	N	C	V	R	P	G	F	I	Y	T	E	M	H	A	S	G	G	E	.	.	.	.	.	P	G	R	V	D	R	V	K	S	N	I	P	M	Q	.	.	.	.	.	.	.	.	.	R	G	G	Q	A	E	E	V	A	Q	A	I	V	W
Query Conservation																																								.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																							.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		V	N	E	I	Y	A	Q	V	Y	A	R	T	Y	.	.	.	G	F	K	T	I	G	L	R	Y	F	N	V	F	G	R	R	Q	D	P	N	G	A	Y	A	A	V	I	P	K	W	T	A	A	M	L	K	G	D	D	V	Y	I	N	G	D	G	E	T	S	R	D	F	C	Y	I	D	N	V	I	Q	M	N	I	L
Template Known Secondary structure															.	.	.											S			S	T	T					S	T	T														T							S		S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	D	K	A	S	Y	V	T	G	S	F	I	D	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	L	A	K	D	S	A	K	D	N	I	Y	N	V	A	V	G
Template Known Secondary structure				T			G	G	G		S						S		S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions